STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C1General transcription factor IIIC subunit 1. (1798 aa)    
Predicted Functional Partners:
gtf3c5
General transcription factor IIIC, polypeptide 5.
   
 0.982
gtf3c3
General transcription factor IIIC, polypeptide 3.
    
 0.981
gtf3c4
General transcription factor IIIC, polypeptide 4.
   
 0.973
gtf3c2
General transcription factor IIIC, polypeptide 2, beta.
   
 0.954
ENSKMAP00000023793
Zgc:162472.
    
 0.870
ENSKMAP00000016490
General transcription factor IIIAa.
    
 0.842
LOC108249107
BRF1 RNA polymerase III transcription initiation factor subunit b.
   
 
 0.797
ENSKMAP00000024477
TFIIB-type domain-containing protein.
   
 
 0.797
ENSKMAP00000024532
TFIIB domain-containing protein.
   
 
 0.797
LOC108247072
Zinc finger protein 512.
   
 0.791
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.