STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APBB2Amyloid beta precursor protein binding family B member 2. (730 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
    
 0.598
LOC108232458
Amyloid beta (A4) precursor protein b.
    
 0.598
mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
  0.548
aplp2
Amyloid beta (A4) precursor-like protein 2.
    
 0.533
LOC108230987
Mitogen-activated protein kinase.
    
 0.516
LOC108234067
Mitogen-activated protein kinase.
    
 0.516
rad50
RAD50 homolog, double strand break repair protein.
   
 0.507
cd44
CD44 molecule (Indian blood group) b.
     
 0.504
nuf2
UF2 component of NDC80 kinetochore complex.
   
 0.497
aplp1
Amyloid beta (A4) precursor-like protein 1.
    
 0.488
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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