STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108244774Ig-like domain-containing protein. (245 aa)    
Predicted Functional Partners:
lrit3
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
 0.508
ENSKMAP00000015694
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3b.
    
 0.489
lrit1
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
    
 0.489
LOC108245030
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
 0.489
slit2
Slit homolog 2 (Drosophila).
   
 0.447
LRRC3
Leucine rich repeat containing 3.
   
 0.447
LOC108247446
Slit homolog 1b (Drosophila).
   
 0.447
LOC108229644
Uncharacterized protein.
   
 0.447
lrrc3b
Leucine rich repeat containing 3B.
   
 0.447
LOC108237150
Leucine rich repeat containing 3Ca.
   
 0.447
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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