STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dlx3Distal-less homeobox 3b. (280 aa)    
Predicted Functional Partners:
gata3
GATA binding protein 3.
   
  
 0.680
foxi2
Forkhead box i1.
    
 
 0.659
meis2
Meis homeobox 2a.
    
 
 0.608
meis1
Meis homeobox 1 b.
    
 
 0.608
bambi
BMP and activin membrane-bound inhibitor homolog; Negatively regulates TGF-beta signaling. Belongs to the BAMBI family.
   
  
 0.576
foxn1
Forkhead box N1.
    
 
 0.566
pax8
Paired box 8.
      
 0.563
Hcrt
Hypocretin (orexin) neuropeptide precursor.
      
 0.563
lamb3
Uncharacterized protein.
      
 0.558
LOC108243774
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
      
 0.550
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.