STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAK3Non-specific serine/threonine protein kinase. (575 aa)    
Predicted Functional Partners:
LOC108232479
Rho guanine nucleotide exchange factor (GEF) 7a.
    
 0.977
arhgef6
Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6.
    
 0.977
LOC108244166
Rho guanine nucleotide exchange factor (GEF) 7b.
    
 0.977
nck2
Cytoplasmic protein.
    
 0.971
nck1
Cytoplasmic protein.
    
 0.971
LOC108246059
LIM domain kinase 1a.
    
0.961
limk2
LIM domain kinase 2.
    
0.961
LOC108248645
Cell division cycle 42.
   
 0.954
CDC42
Cell division cycle 42.
   
 0.954
LOC108238894
LIM domain kinase 1b.
    
0.947
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.