STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108244664Synaptosomal-associated protein; Belongs to the SNAP-25 family. (180 aa)    
Predicted Functional Partners:
VAMP3
Vesicle associated membrane protein 3.
   
 0.924
LOC108229183
Complexin 2.
   
 0.846
ENSKMAP00000010283
Zgc:92912.
   
 0.823
vamp2
Vesicle-associated membrane protein 2.
   
 0.823
LOC108242626
Vesicle-associated membrane protein 1.
   
 0.823
vamp7
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
    
 0.816
LOC108232021
Synaptotagmin IIa.
   
 0.781
syt1
Synaptotagmin Ia.
   
 0.781
LOC108230117
Synaptotagmin Ib.
   
 0.781
LOC108237260
Synaptotagmin Vb.
   
 0.781
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.