STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108245870Si:dkey-26g8.5; Belongs to the peptidase C1 family. (336 aa)    
Predicted Functional Partners:
LOC108237026
Baculoviral IAP repeat containing 2.
     
 0.670
xiap
X-linked inhibitor of apoptosis.
     
 0.664
LOC108229311
Uncharacterized protein.
   
 
 0.660
bcl2
BCL2 apoptosis regulator b.
   
 
 0.660
LOC108244583
Baculoviral IAP repeat containing 5b.
     
 0.659
LOC108237147
Baculoviral IAP repeat containing 5a.
     
 0.659
bcl2l1
BCL2 like 1.
     
 0.655
LOC108244384
BH4_2 domain-containing protein.
     
 0.655
LOC108240069
Cathepsin Bb; Belongs to the peptidase C1 family.
  
0.513
CTSD
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
   
 0.506
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.