STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSKMAP00000013724Uncharacterized protein. (187 aa)    
Predicted Functional Partners:
LOC108233256
X globin; Belongs to the globin family.
   
 
 0.667
Ngb
GLOBIN domain-containing protein; Belongs to the globin family.
   
 
 0.666
tmem160
Transmembrane protein 160.
      
 0.662
LOC108244332
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
   
 
 0.634
Heg1
Uncharacterized protein.
    
 
 0.597
ENSKMAP00000029922
Zgc:153738.
   
 
 0.575
CYGB
Cytoglobin; Belongs to the globin family.
   
 
 0.573
LOC108248864
Cytoglobin 2; Belongs to the globin family.
   
 
 0.573
alad
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
      
 0.571
gpn3
GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
      
 0.571
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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