STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PtproProtein tyrosine phosphatase receptor type O. (360 aa)    
Predicted Functional Partners:
ENSKMAP00000001210
Protein kinase domain-containing protein.
    
 0.705
LOC108231402
Macrophage stimulating 1 receptor a.
    
 0.705
ENSKMAP00000014853
Sema domain-containing protein.
    
 0.705
mst1r
Macrophage stimulating 1 receptor b.
    
 0.705
ENSKMAP00000000575
Alpha-carbonic anhydrase domain-containing protein.
 
 
 0.536
rpl13a
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
   
  0.484
pdgfra
Platelet-derived growth factor receptor, alpha polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
 0.443
flt3
Fms-related tyrosine kinase 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
 0.443
ptn
Pleiotrophin.
   
 0.438
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.