STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108236090Prostaglandin E receptor 1b (subtype EP1). (370 aa)    
Predicted Functional Partners:
LOC108230804
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
    
  0.783
LOC108230762
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.771
LOC108235078
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.771
LOC108234416
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.771
LOC108234608
Uncharacterized protein.
    
 0.771
LOC108230976
G protein subunit alpha q.
    
  0.708
LOC108249780
Growth hormone secretagogue receptor b; Belongs to the G-protein coupled receptor 1 family.
     
 0.682
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.