STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spon2Spondin 2b, extracellular matrix protein. (338 aa)    
Predicted Functional Partners:
adar
Adenosine deaminase RNA specific.
      
 0.662
thrap3
Thyroid hormone receptor associated protein 3b.
      
 0.636
dnajc28
DnaJ (Hsp40) homolog, subfamily C, member 28.
      
 0.569
LOC108246606
Cyclin-dependent kinase inhibitor 1Bb.
      
 0.565
pofut2
Protein O-fucosyltransferase 2.
     
 0.552
aldh7a1
Aldehyde dehydrogenase 7 family, member A1; Belongs to the aldehyde dehydrogenase family.
   
  
 0.499
LOC108244027
Bone morphogenetic protein 6.
      
 0.491
tpx2
TPX2 microtubule nucleation factor.
      
 0.471
LOC108236918
Beta 3-glucosyltransferase b.
     
 0.436
LOC108235972
Beta 3-glucosyltransferase a.
     
 0.436
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.