STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108237737Cyclin-dependent kinase 21; Belongs to the protein kinase superfamily. (288 aa)    
Predicted Functional Partners:
cdc6
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
   
 0.772
orc2
Origin recognition complex, subunit 2.
 
 
 0.753
intu
Inturned planar cell polarity protein.
   
 0.715
LOC108238293
Fizzy/cell division cycle 20 related 1b.
   
 0.715
FZR1
Fizzy/cell division cycle 20 related 1a.
   
 0.715
cdc20
Cell division cycle 20 homolog.
   
 0.715
pkmyt1
Protein kinase, membrane associated tyrosine/threonine 1; Belongs to the protein kinase superfamily.
  
 0.715
mcm3
DNA helicase; Belongs to the MCM family.
   
 0.684
ENSKMAP00000001053
Uncharacterized protein.
    
 0.679
cdc7
Cell division cycle 7 homolog (S. cerevisiae).
   
 0.668
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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