STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSKMAP00000014853Sema domain-containing protein. (734 aa)    
Predicted Functional Partners:
ENSKMAP00000001210
Protein kinase domain-containing protein.
 
  
 0.963
LOC108235488
Cbl proto-oncogene C, E3 ubiquitin protein ligase.
   
 0.950
cbl
Cbl proto-oncogene, E3 ubiquitin protein ligase.
   
 0.950
LOC108238085
Uncharacterized protein.
   
 0.950
LOC108239873
Tensin 2b.
   
 0.940
TNS1
Tensin 1.
   
 0.940
ENSKMAP00000004278
Uncharacterized protein.
   
 0.940
LOC108233083
Tensin 2a.
   
 0.940
LOC108229671
Phosphatase tensin-type domain-containing protein.
   
 0.940
TNS3
Tensin 3.
   
 0.940
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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