STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
evplEnvoplakin a. (1989 aa)    
Predicted Functional Partners:
ppl
Periplakin.
  
 
0.736
LOC108233107
Keratin 5; Belongs to the intermediate filament family.
   
 0.645
LOC108231367
Kazrin, periplakin interacting protein b.
    
 0.571
KAZN
Kazrin, periplakin interacting protein a.
    
 0.571
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
    
 
 0.568
DSC1
Desmocollin 3; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.527
LOC108233108
Keratin 8; Belongs to the intermediate filament family.
   
 
 0.521
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
     
 0.516
LOC108236140
DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family.
     
 0.501
LOC108236365
Junction plakoglobin a.
   
 0.499
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.