STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fermt2Fermitin family member 2. (696 aa)    
Predicted Functional Partners:
ILK
Integrin linked kinase.
   
 0.789
fblim1
Filamin binding LIM protein 1.
    
 0.778
LOC108236879
Uncharacterized protein.
   
 0.709
LOC108240214
LIM domain containing preferred translocation partner in lipoma.
    
 0.682
LOC108249528
Uncharacterized protein.
    
 0.682
prkcd
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
     
 0.668
dapk3
Death-associated protein kinase 3; Belongs to the protein kinase superfamily.
      
 0.661
itgb6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.550
LOC108240439
LIM domain-containing protein.
   
 
 0.549
LOC108250040
LIM domain-containing protein.
   
 
 0.549
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.