STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108247586Forkhead box P1b. (674 aa)    
Predicted Functional Partners:
frmd4b
FERM domain containing 4Bb.
      
 0.679
mdfic
MyoD family inhibitor domain containing.
 
    
 0.629
AANAT
Arylalkylamine N-acetyltransferase 1.
      
 0.622
ENSKMAP00000013381
2-epi-5-epi-valiolone synthase.
      
 0.621
prdm14
PR domain containing 14.
    
 0.594
MITF
Melanocyte inducing transcription factor b.
      
 0.590
LOC108247585
FERM domain containing 4Ba.
      
 0.563
cbfb
Core-binding factor subunit beta.
    
 0.547
nfatc2
Nuclear factor of activated T cells 2a.
    
 0.507
LOC108245177
Signal transducer and activator of transcription.
    
 
 0.435
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.