STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSKMAP00000015636Lipoxygenase homology domains 1a. (1964 aa)    
Predicted Functional Partners:
ENSKMAP00000002296
RP1 axonemal microtubule associated.
 
  
 
 0.527
LOC108247812
Uncharacterized protein.
    
 0.425
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
    
 0.424
agtpbp1
ATP/GTP binding protein 1.
     
 0.416
ENSKMAP00000002137
Ring finger protein 213b.
    
 0.412
rnf213
Ring finger protein 213a.
    
 0.412
slc26a5
Solute carrier family 26 member 5.
   
  
 0.412
LOC108239593
Otolin 1a.
      
 0.405
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (18%) [HD]