STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSKMAP00000015797Spermatogenesis associated 22. (248 aa)    
Predicted Functional Partners:
ENSKMAP00000009313
Methionine sulfoxide reductase B1b.
      
 0.661
hsf2bp
Heat shock transcription factor 2 binding protein.
      
 0.586
ENSKMAP00000009710
J domain-containing protein.
      
 0.584
aifm3
Apoptosis inducing factor mitochondria associated 3.
   
  
 0.574
Syce3
Uncharacterized protein.
      
 0.569
sycp3
Synaptonemal complex protein 3.
      
 0.566
spata20
Spermatogenesis associated 20.
      
 0.564
e4f1
E4F transcription factor 1.
      
 0.564
LOC108249275
Sperm associated antigen 8.
      
 0.491
lrrc42
Leucine rich repeat containing 42.
      
 0.489
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.