STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108241825Neuroepithelial cell transforming 1. (539 aa)    
Predicted Functional Partners:
LOC108233110
Uncharacterized protein.
    
 0.525
LOC108249419
Uncharacterized protein.
    
 0.525
LOC108231613
Ras homolog family member Ca.
    
 0.525
RHOB
Ras homolog family member B.
    
 0.525
LOC108235226
Uncharacterized protein.
    
 0.525
LOC108235231
Uncharacterized protein.
    
 0.525
LOC108235763
Uncharacterized protein.
    
 0.525
LOC108244606
Rho family GTPase 1b.
    
 0.510
RND1
Rho family GTPase 1.
    
 0.510
rnd3
Rho family GTPase 3a.
    
 0.510
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.