STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108243559Regulator of G protein signaling 13. (194 aa)    
Predicted Functional Partners:
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
    
 0.556
cct5
Chaperonin containing TCP1, subunit 5 (epsilon).
    
 0.550
ENSKMAP00000020815
APC_N_CC domain-containing protein.
   
 0.508
apc2
APC regulator of WNT signaling pathway 2.
   
 0.508
gsk3a
Glycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily.
    
 0.507
LOC108249892
Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.
    
 0.507
gsk3b
Glycogen synthase kinase 3 beta, genome duplicate a; Belongs to the protein kinase superfamily.
    
 0.507
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
   
 0.500
LOC108231344
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
   
 0.500
LOC108235428
Guanine nucleotide binding protein (G protein), beta polypeptide 3a.
   
 0.500
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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