STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108236765Hairy-related 12. (142 aa)    
Predicted Functional Partners:
rnf207
Ring finger protein 207a.
    
 
 0.684
nol9
Nucleolar protein 9.
      
 0.679
neurod1
Neurogenic differentiation factor.
   
 0.513
fancg
FA complementation group G.
   
 
 0.509
fancl
FA complementation group L.
    
 
 0.502
fancf
FA complementation group F.
    
 
 0.496
ENSKMAP00000018989
Uncharacterized protein.
    
   0.489
grik5
Glutamate receptor, ionotropic, kainate 5.
      
 0.480
LOC108247816
Uncharacterized protein.
      
 0.480
atoh7
Atonal bHLH transcription factor 7.
   
 
 0.475
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.