STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtch2Mitochondrial carrier homolog 2; Belongs to the mitochondrial carrier (TC 2.A.29) family. (301 aa)    
Predicted Functional Partners:
LOC108248658
PTPRF interacting protein alpha 1.
      
 0.662
lto1
LTO1 maturation factor of ABCE1.
      
 0.662
LOC108247515
Protein tyrosine phosphatase receptor type Fa.
      
 0.563
LOC108232870
Protein tyrosine phosphatase receptor type Fb.
      
 0.563
cttn
Cortactin.
    
 
 0.496
mcm6
DNA helicase; Belongs to the MCM family.
      
 0.495
mrpl53
Mitochondrial ribosomal protein L53.
      
 0.455
mrps33
Mitochondrial ribosomal protein S33.
      
 0.408
fgf19
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
   
  
 0.405
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.