STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbm33RNA binding motif protein 33a. (1228 aa)    
Predicted Functional Partners:
pgbd5
PiggyBac transposable element derived 5.
   
 
 0.608
samd11
Sterile alpha motif domain containing 11.
      
 0.608
USP24
Ubiquitin specific peptidase 24; Belongs to the peptidase C19 family.
   
 
 0.595
fggy
FGGY carbohydrate kinase domain containing.
   
 0.593
nom1
MI domain-containing protein.
      
 0.563
rnf32
Ring finger protein 32.
     
 0.551
LOC108231466
KRAP_IP3R_bind domain-containing protein.
      
 0.487
aig1
Androgen-induced 1 (H. sapiens).
      
 0.487
dnajc21
DnaJ heat shock protein family (Hsp40) member C21.
      
 0.482
bcl7b
BAF chromatin remodeling complex subunit BCL7B b.
      
 0.426
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.