STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
terb1Telomere repeat binding bouquet formation protein 1. (806 aa)    
Predicted Functional Partners:
terb2
Uncharacterized protein.
    
 
 0.926
terf1
Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat.
    
 
 0.922
sun2
SUN domain-containing protein.
    
 
 0.667
LOC108231909
Si:ch73-12o23.1; Belongs to the glycosyl hydrolase 31 family.
      
 0.629
gaa
Glucosidase, alpha; acid (Pompe disease, glycogen storage disease type II); Belongs to the glycosyl hydrolase 31 family.
      
 0.629
basp1
Brain abundant, membrane attached signal protein 1.
      
 0.566
ENSKMAP00000015463
Si:ch211-191j22.3.
      
 0.566
sun1
SUN domain-containing protein.
    
 
 0.511
fam210b
Family with sequence similarity 210 member B.
      
 0.447
ENSKMAP00000011211
SUN domain-containing protein.
    
 
 0.428
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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