STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptprn2Protein tyrosine phosphatase receptor type N2. (1062 aa)    
Predicted Functional Partners:
pcsk2
Proprotein convertase subtilisin/kexin type 2; Belongs to the peptidase S8 family.
   
  
 0.546
LOC108237678
Glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca.
    
 
 0.522
ENSKMAP00000025794
Potassium voltage-gated channel, Shal-related subfamily, member 1; Belongs to the potassium channel family.
      
 0.487
LOC108238168
Down syndrome cell adhesion molecule b.
   
 0.466
LOC108247975
Down syndrome cell adhesion molecule a.
   
 0.465
CDH8
Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins.
   
 0.463
ENSKMAP00000001210
Protein kinase domain-containing protein.
   
 0.436
LOC108231402
Macrophage stimulating 1 receptor a.
   
 0.436
ENSKMAP00000014853
Sema domain-containing protein.
   
 0.436
mst1r
Macrophage stimulating 1 receptor b.
   
 0.436
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.