STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108242481Doublecortin domain-containing protein. (4030 aa)    
Predicted Functional Partners:
pot1
Protection of telomeres 1 homolog.
    
 
 0.577
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
    
 
 0.428
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
    
 
 0.428
guca1a
Guanylate cyclase activator 1A.
   
 
 0.415
ENSKMAP00000022162
Uncharacterized protein.
      
 0.410
arl2bp
ADP-ribosylation factor-like 2 binding protein.
      
 0.410
ttc8
Tetratricopeptide repeat domain 8.
      
 0.407
sox7
SRY-box transcription factor 7.
    
 
 0.402
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.