STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108244193Interleukin 1 receptor type 2. (418 aa)    
Predicted Functional Partners:
LOC108242738
Interleukin-1.
   
 0.997
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
      
 0.624
LOC108244205
Zmp:0000000936.
  
 
 0.562
LOC108235434
Uncharacterized protein.
      
 0.551
map3k8
Mitogen-activated protein kinase kinase kinase 8.
   
  
 0.542
tnfsf13b
TNF superfamily member 13b; Belongs to the tumor necrosis factor family.
    
 
 0.504
LOC108232954
Uncharacterized protein.
  
     0.490
irak1bp1
Interleukin-1 receptor-associated kinase 1 binding protein 1.
      
 0.489
LOC108246305
BZIP domain-containing protein.
  
 
  0.468
LOC108240042
Uncharacterized protein.
  
     0.466
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.