Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC108230019 | LOC108230822 | ENSKMAP00000021260 | ENSKMAP00000005008 | Repulsive guidance molecule BMP co-receptor a. | RGM domain family, member D. | 0.904 |
LOC108230019 | LOC108235705 | ENSKMAP00000021260 | ENSKMAP00000017167 | Repulsive guidance molecule BMP co-receptor a. | Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | 0.950 |
LOC108230019 | LOC108240283 | ENSKMAP00000021260 | ENSKMAP00000024291 | Repulsive guidance molecule BMP co-receptor a. | Immunoglobulin superfamily, DCC subclass, member 4. | 0.535 |
LOC108230019 | LOC108247544 | ENSKMAP00000021260 | ENSKMAP00000013596 | Repulsive guidance molecule BMP co-receptor a. | Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | 0.914 |
LOC108230019 | acvr1 | ENSKMAP00000021260 | ENSKMAP00000017822 | Repulsive guidance molecule BMP co-receptor a. | Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | 0.914 |
LOC108230019 | bmpr1a | ENSKMAP00000021260 | ENSKMAP00000006102 | Repulsive guidance molecule BMP co-receptor a. | Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | 0.914 |
LOC108230019 | bmpr1b | ENSKMAP00000021260 | ENSKMAP00000027304 | Repulsive guidance molecule BMP co-receptor a. | Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | 0.914 |
LOC108230019 | dcc | ENSKMAP00000021260 | ENSKMAP00000003172 | Repulsive guidance molecule BMP co-receptor a. | DCC netrin 1 receptor. | 0.617 |
LOC108230019 | neo1 | ENSKMAP00000021260 | ENSKMAP00000002201 | Repulsive guidance molecule BMP co-receptor a. | Neogenin 1b. | 0.617 |
LOC108230019 | rgmb | ENSKMAP00000021260 | ENSKMAP00000017708 | Repulsive guidance molecule BMP co-receptor a. | Repulsive guidance molecule BMP co-receptor b. | 0.905 |
LOC108230822 | LOC108230019 | ENSKMAP00000005008 | ENSKMAP00000021260 | RGM domain family, member D. | Repulsive guidance molecule BMP co-receptor a. | 0.904 |
LOC108230822 | LOC108235705 | ENSKMAP00000005008 | ENSKMAP00000017167 | RGM domain family, member D. | Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | 0.919 |
LOC108230822 | LOC108240283 | ENSKMAP00000005008 | ENSKMAP00000024291 | RGM domain family, member D. | Immunoglobulin superfamily, DCC subclass, member 4. | 0.754 |
LOC108230822 | LOC108247544 | ENSKMAP00000005008 | ENSKMAP00000013596 | RGM domain family, member D. | Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | 0.919 |
LOC108230822 | acvr1 | ENSKMAP00000005008 | ENSKMAP00000017822 | RGM domain family, member D. | Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | 0.919 |
LOC108230822 | bmpr1a | ENSKMAP00000005008 | ENSKMAP00000006102 | RGM domain family, member D. | Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | 0.919 |
LOC108230822 | bmpr1b | ENSKMAP00000005008 | ENSKMAP00000027304 | RGM domain family, member D. | Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. | 0.919 |
LOC108230822 | dcc | ENSKMAP00000005008 | ENSKMAP00000003172 | RGM domain family, member D. | DCC netrin 1 receptor. | 0.755 |
LOC108230822 | neo1 | ENSKMAP00000005008 | ENSKMAP00000002201 | RGM domain family, member D. | Neogenin 1b. | 0.755 |
LOC108230822 | rgmb | ENSKMAP00000005008 | ENSKMAP00000017708 | RGM domain family, member D. | Repulsive guidance molecule BMP co-receptor b. | 0.904 |
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