STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108241338DnaJ heat shock protein family (Hsp40) member B1a. (336 aa)    
Predicted Functional Partners:
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
 
 0.814
stip1
Stress-induced phosphoprotein 1.
   
 0.780
LOC108251650
Uncharacterized protein; Belongs to the heat shock protein 70 family.
 
 0.777
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
 
 0.777
LOC108251765
Heat shock 70 kDa protein 1-like.
 
 0.777
LOC108228473
Heat shock 70 kDa protein 1-like.
 
 0.777
LOC108236850
Heat shock protein 70.1; Belongs to the heat shock protein 70 family.
 
 0.777
LOC108243113
Uncharacterized protein; Belongs to the heat shock protein 70 family.
 
 0.773
LOC108241987
Heat shock cognate 70; Belongs to the heat shock protein 70 family.
 
 0.773
HSPA8
Heat shock protein 8; Belongs to the heat shock protein 70 family.
 
 0.772
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.