STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108230311Si:ch73-174h16.4. (553 aa)    
Predicted Functional Partners:
fgf23
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
    
 0.713
fgf19
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.699
ydjc
YdjC chitooligosaccharide deacetylase homolog.
  
 
 0.571
ENSKMAP00000020038
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.550
rps27a
Ribosomal protein S27a.
    
 0.495
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.475
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.475
fgf3
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.471
LOC108239148
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.467
fgf7
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.465
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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