STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ano6Anoctamin. (918 aa)    
Predicted Functional Partners:
calhm1
Calcium homeostasis modulator 1.
      
 0.663
LOC108248933
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
      
 0.547
panx1
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
      
 0.547
ENSKMAP00000010857
XK-related protein.
      
 0.426
edil3
EGF-like repeats and discoidin I-like domains 3a.
     
 0.419
itprip
Inositol 1,4,5-trisphosphate receptor interacting protein.
      
 0.410
cacybp
Calcyclin binding protein.
      
 0.408
smpdl3b
Acid sphingomyelinase-like phosphodiesterase.
      
 0.408
WDR1
WD repeat domain 1.
      
 0.408
mogs
Mannosyl-oligosaccharide glucosidase.
      
 0.407
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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