STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EME2ERCC4 domain-containing protein. (416 aa)    
Predicted Functional Partners:
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.988
LOC108246201
Essential meiotic structure-specific endonuclease 1.
     
0.791
ercc4
Excision repair cross-complementation group 4.
    
 0.673
faap24
FA core complex associated protein 24.
    
 0.618
exo1
Exonuclease 1.
   
 0.615
fancm
Helicase C-terminal domain-containing protein.
    
 0.608
ENSKMAP00000012494
Helicase ATP-binding domain-containing protein.
    
 0.608
DNA2
DNA replication helicase/nuclease 2.
    
 0.601
slx4
SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae).
    
 0.589
palb2
PALB2_WD40 domain-containing protein.
    
 0.587
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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