STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108248282Cholinergic receptor, nicotinic, epsilon. (518 aa)    
Predicted Functional Partners:
chrna1
Cholinergic receptor, nicotinic, alpha 1 (muscle).
  
0.803
ENSKMAP00000008661
Cholinergic receptor, nicotinic, alpha 4b.
  
 
0.690
rapsn
Receptor-associated protein of the synapse, 43kD.
   
 
 0.545
chrna2
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
  
 
0.533
MUSK
Muscle associated receptor tyrosine kinase.
    
 
 0.495
LOC108236400
Cholinergic receptor, nicotinic, beta polypeptide 3a.
  
0.459
LOC108243086
Cholinergic receptor, nicotinic, beta 3b (neuronal).
  
0.459
chrna5
Cholinergic receptor, nicotinic, alpha 5.
  
0.454
LOC108240247
Cholinergic receptor, nicotinic, beta 4 (neuronal).
  
  
 
0.442
chrng
Cholinergic receptor, nicotinic, gamma.
  
  
 
0.415
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.