STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trap1TNF receptor-associated protein 1. (724 aa)    
Predicted Functional Partners:
stip1
Stress-induced phosphoprotein 1.
   
 0.929
ppp5c
Serine/threonine-protein phosphatase.
   
 0.859
LOC108244561
Prostaglandin E synthase 3a (cytosolic).
   
 0.853
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
   
 0.853
LOC108231934
Prostaglandin E synthase 3b (cytosolic).
   
 0.853
tsc2
TSC complex subunit 2.
   
 0.852
LOC108237195
Si:ch211-131k2.3.
   
 0.821
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
   
 0.817
LOC108248368
TBC1 domain family, member 7.
    
 0.815
ppid
Peptidylprolyl isomerase D.
  
 0.804
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.