STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcyt1bPhosphate cytidylyltransferase 1, choline, beta a. (362 aa)    
Predicted Functional Partners:
LOC108229858
Choline kinase beta.
     
 0.981
chpt1
Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.977
LOC108243469
Choline kinase alpha.
     
 0.964
cept1
Choline/ethanolamine phosphotransferase 1b; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.955
LOC108246673
Phosphoethanolamine methyltransferase.
  
 
 0.947
pcyt1a
Phosphate cytidylyltransferase 1, choline, alpha a.
  
  
 
0.929
ENSKMAP00000024286
Uncharacterized protein.
     
 0.912
phospho1
Phosphatase, orphan 1.
     
 0.912
LOC108236966
Phosphate cytidylyltransferase 1, choline, beta b.
  
  
 
0.901
smpd4
Sphingomyelin phosphodiesterase 4.
      
 0.659
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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