STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rmnd1Required for meiotic nuclear division 1 homolog. (421 aa)    
Predicted Functional Partners:
utp15
UTP15 small subunit processome component.
      
 0.679
robo4
Roundabout, axon guidance receptor, homolog 4 (Drosophila).
      
 0.662
mtg2
Mitochondrial ribosome-associated GTPase 2.
   
  
 0.611
UTP14C
UTP14C small subunit processome component.
      
 0.599
armt1
Acidic residue methyltransferase 1.
   
  
 0.587
twnk
Twinkle mtDNA helicase.
      
 0.574
trmt5
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.
   
  
 0.572
ENSKMAP00000003556
Transmembrane protein 70.
   
  
 0.565
pyroxd2
Pyridine nucleotide-disulphide oxidoreductase domain 2.
      
 0.562
clybl
Citrate lyase beta like.
   
  
 0.540
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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