STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsph9Radial spoke head 9 homolog. (276 aa)    
Predicted Functional Partners:
LOC108251537
Radial spoke head component 4A.
  
 0.966
gak
Cyclin G associated kinase.
   
 0.960
rsph1
Uncharacterized protein.
   
 
 0.924
rsph3
Radial spoke head 3.
  
 
 0.808
ap1g1
AP-1 complex subunit gamma.
   
 0.739
LOC108238648
AP-1 complex subunit gamma.
   
 0.739
Ap4e1
Adaptor related protein complex 4 subunit epsilon 1.
   
 0.739
ap4b1
Adaptor related protein complex 4 subunit beta 1.
    
 0.731
ap1b1
AP complex subunit beta.
    
 0.731
LOC108238077
AP complex subunit beta.
    
 0.731
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.