STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grip2Glutamate receptor interacting protein 2b. (1178 aa)    
Predicted Functional Partners:
pick1
Protein interacting with prkca 1.
   
 0.741
LOC108238201
Endothelin receptor Ba; Belongs to the G-protein coupled receptor 1 family.
   
 
 0.679
plk3
Serine/threonine-protein kinase PLK.
    
 
 0.643
LOC108246920
Uncharacterized protein.
    
 0.623
gria2
Glutamate receptor, ionotropic, AMPA 2b.
    
 0.623
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.593
Ift172
Uncharacterized protein.
    
 0.585
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.584
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.581
LOC108232064
Glycerol-3-phosphate dehydrogenase [NAD(+)].
      
 0.564
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.