STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108243149Forkhead box H1. (484 aa)    
Predicted Functional Partners:
drap1
DR1-associated protein 1 (negative cofactor 2 alpha).
    
 0.856
LOC108235010
Mothers against decapentaplegic homolog.
    
 0.785
LOC108237917
Mothers against decapentaplegic homolog.
    
 0.785
smad2
Mothers against decapentaplegic homolog.
    
 0.785
smad3
Mothers against decapentaplegic homolog.
    
 0.785
LOC108247541
Mothers against decapentaplegic homolog.
    
 0.649
LOC108228999
Mothers against decapentaplegic homolog.
    
 0.649
mixl1
Mix paired-like homeobox.
   
 0.649
SMAD4
Mothers against decapentaplegic homolog.
    
 0.649
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
    
 0.640
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.