STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rabl3RAB, member of RAS oncogene family-like 3. (233 aa)    
Predicted Functional Partners:
rabggta
Rab geranylgeranyltransferase subunit alpha.
    
 
 0.638
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
  
 0.627
SPRYD3
SPRY domain containing 3.
      
 0.624
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
  
 0.623
rab24
RAB24, member RAS oncogene family.
   
  
 0.606
gtf2e1
General transcription factor IIE, polypeptide 1, alpha.
   
  
 0.601
grpel1
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.588
rab3gap1
RAB3 GTPase activating protein subunit 1.
      
 0.576
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.573
hspa4l
Heat shock protein 4 like.
  
 0.571
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (16%) [HD]