STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf143Zinc finger protein 143b. (627 aa)    
Predicted Functional Partners:
sp1
Sp1 transcription factor.
    
 
0.779
gtf2a2
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
     
 0.756
gtf2b
General transcription factor IIB.
   
 0.683
LOC108250675
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.682
taf11
TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.677
polr3c
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.622
ezh2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.609
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.609
polr3b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.600
taf6
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
  0.592
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
Server load: low (20%) [HD]