STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ube2zUbiquitin-conjugating enzyme E2Z. (392 aa)    
Predicted Functional Partners:
ENSKMAP00000029729
TMEM189_B_dmain domain-containing protein.
   
 0.927
LOC108249566
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.926
trip12
Thyroid hormone receptor interactor 12.
   
 0.863
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.785
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
   
 0.760
ube2j1
Ubiquitin-conjugating enzyme E2, J1.
     
0.740
uba6
Ubiquitin like modifier activating enzyme 6.
  
 0.733
LOC108231167
Ubiquitin-like modifier activating enzyme 7; Belongs to the ubiquitin-activating E1 family.
  
 0.733
uba1
Ubiquitin-like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
  
 0.733
ENSKMAP00000019873
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.725
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.