STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pkd1l1Uncharacterized protein. (2316 aa)    
Predicted Functional Partners:
SLC9A3R2
Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression.
      
 0.635
dpcd
Deleted in primary ciliary dyskinesia homolog (mouse).
      
 0.565
kif3a
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.518
LOC108244339
DAN domain family, member 5.
      
 0.518
sec63
SEC63 homolog, protein translocation regulator.
    
 
 0.496
exoc5
Exocyst complex component 5.
     
 0.493
LOC108230480
Uncharacterized protein.
  
 
 
 0.423
ENSKMAP00000029615
Rhomboid domain containing 2.
      
 0.420
trpm2
Transient receptor potential cation channel, subfamily M, member 2.
      
 0.410
pkd2
Polycystic kidney disease 2.
      
 0.403
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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