STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajc17DnaJ (Hsp40) homolog, subfamily C, member 17. (315 aa)    
Predicted Functional Partners:
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
    
 
 0.980
Ankrd9
Ankyrin repeat domain 9.
   
  
 0.665
ibtk
Inhibitor of Bruton agammaglobulinemia tyrosine kinase.
      
 0.661
tfpt
TCF3 (E2A) fusion partner.
   
    0.593
LOC108234259
Amyloid beta precursor protein binding family A member 3.
      
 0.585
lrrc57
Leucine rich repeat containing 57.
   
  
 0.505
gak
Cyclin G associated kinase.
    
 
 0.502
zfyve19
Zinc finger, FYVE domain containing 19.
      
 0.465
bud13
BUD13 homolog.
   
  
 0.442
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
      
 0.437
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.