STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
il18Uncharacterized protein. (202 aa)    
Predicted Functional Partners:
LOC108249358
Ig-like domain-containing protein.
   
 0.935
LOC108249357
Uncharacterized protein.
   
 0.935
ENSKMAP00000011188
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
     
 0.914
LOC108239405
V-rel avian reticuloendotheliosis viral oncogene homolog A.
     
 0.906
LOC108242738
Interleukin-1.
   
 0.720
il10
Interleukin 10.
   
 
 0.719
mep1b
Meprin A subunit.
      
 0.679
myd88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
      
 0.645
Pycard
CARD domain-containing protein.
      
 0.616
LOC108247415
Ras-related GTP binding A.
     
 0.591
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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