STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108248314Sorting nexin 22. (186 aa)    
Predicted Functional Partners:
snx24
Sorting nexin 24.
  
 
  
0.577
LOC108240323
Cytochrome b561 family, member D1.
      
 0.569
ENSKMAP00000027398
Uncharacterized protein.
      
 0.564
nudt17
Nudix (nucleoside diphosphate linked moiety X)-type motif 17.
      
 0.539
gapvd1
GTPase activating protein and VPS9 domains 1.
    
 
 0.454
Wdfy4
WDFY family member 4.
      
 0.442
LOC108241896
Uncharacterized protein.
    
 
 0.418
fnbp1
Formin binding protein 1b.
    
 
 0.418
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.