STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hspa5Heat shock protein 5; Belongs to the heat shock protein 70 family. (653 aa)    
Predicted Functional Partners:
hyou1
Hypoxia up-regulated 1.
  
 
0.993
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 0.991
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
  
 0.988
manf
Mesencephalic astrocyte-derived neurotrophic factor.
   
 
 0.985
dnajb11
DnaJ heat shock protein family (Hsp40) member B11.
 
 0.984
LOC108230540
Calreticulin.
   
 0.974
sil1
SIL1 nucleotide exchange factor.
   
 
 0.972
derl1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
   
 0.971
sec63
SEC63 homolog, protein translocation regulator.
  
 
 0.964
pdia6
Protein disulfide isomerase family A, member 6; Belongs to the protein disulfide isomerase family.
  
 0.961
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.