Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC108230069 | LOC108230212 | ENSKMAP00000028397 | ENSKMAP00000021877 | RAB3A interacting protein (rabin3)-like 1. | Zgc:162879. | 0.585 |
LOC108230069 | LOC108235581 | ENSKMAP00000028397 | ENSKMAP00000029387 | RAB3A interacting protein (rabin3)-like 1. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.580 |
LOC108230069 | LOC108237628 | ENSKMAP00000028397 | ENSKMAP00000002590 | RAB3A interacting protein (rabin3)-like 1. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.580 |
LOC108230069 | LOC108241889 | ENSKMAP00000028397 | ENSKMAP00000014946 | RAB3A interacting protein (rabin3)-like 1. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.580 |
LOC108230069 | LOC108251494 | ENSKMAP00000028397 | ENSKMAP00000001772 | RAB3A interacting protein (rabin3)-like 1. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.509 |
LOC108230069 | exoc1 | ENSKMAP00000028397 | ENSKMAP00000007023 | RAB3A interacting protein (rabin3)-like 1. | Exocyst complex component 1. | 0.781 |
LOC108230069 | exoc2 | ENSKMAP00000028397 | ENSKMAP00000012690 | RAB3A interacting protein (rabin3)-like 1. | Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | 0.781 |
LOC108230069 | exoc4 | ENSKMAP00000028397 | ENSKMAP00000021070 | RAB3A interacting protein (rabin3)-like 1. | Exocyst complex component 4. | 0.797 |
LOC108230069 | exoc7 | ENSKMAP00000028397 | ENSKMAP00000000391 | RAB3A interacting protein (rabin3)-like 1. | Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. | 0.738 |
LOC108230212 | LOC108230069 | ENSKMAP00000021877 | ENSKMAP00000028397 | Zgc:162879. | RAB3A interacting protein (rabin3)-like 1. | 0.585 |
LOC108230212 | LOC108235581 | ENSKMAP00000021877 | ENSKMAP00000029387 | Zgc:162879. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.540 |
LOC108230212 | LOC108237628 | ENSKMAP00000021877 | ENSKMAP00000002590 | Zgc:162879. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.540 |
LOC108230212 | LOC108241889 | ENSKMAP00000021877 | ENSKMAP00000014946 | Zgc:162879. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.540 |
LOC108230212 | LOC108251494 | ENSKMAP00000021877 | ENSKMAP00000001772 | Zgc:162879. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.529 |
LOC108230212 | exoc1 | ENSKMAP00000021877 | ENSKMAP00000007023 | Zgc:162879. | Exocyst complex component 1. | 0.548 |
LOC108230212 | exoc2 | ENSKMAP00000021877 | ENSKMAP00000012690 | Zgc:162879. | Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | 0.542 |
LOC108230212 | exoc4 | ENSKMAP00000021877 | ENSKMAP00000021070 | Zgc:162879. | Exocyst complex component 4. | 0.551 |
LOC108230212 | exoc7 | ENSKMAP00000021877 | ENSKMAP00000000391 | Zgc:162879. | Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. | 0.532 |
LOC108230212 | rab3ip | ENSKMAP00000021877 | ENSKMAP00000001510 | Zgc:162879. | RAB3A interacting protein (rabin3). | 0.585 |
LOC108235581 | LOC108230069 | ENSKMAP00000029387 | ENSKMAP00000028397 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | RAB3A interacting protein (rabin3)-like 1. | 0.580 |
page 1 of 4