STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108234597Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (571 aa)    
Predicted Functional Partners:
HTR1B-2
5-hydroxytryptamine receptor 1B.
    
 
 0.678
htr2b
5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled.
      
 0.676
Htr1a
5-hydroxytryptamine (serotonin) receptor 1A a.
   
 
 0.676
HTR1B
5-hydroxytryptamine receptor 1B.
    
 
 0.675
maob
Amine oxidase.
      
 0.631
ENSKMAP00000020457
Uncharacterized protein; Belongs to the synuclein family.
   
 
 0.532
nr1h3
Nuclear receptor subfamily 1, group H, member 3.
      
 0.495
pc
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
      
 0.491
ENSKMAP00000017340
5-hydroxytryptamine (serotonin) receptor 2A, genome duplicate a.
      
 0.489
comt
Catechol-O-methyltransferase b.
      
 0.487
Your Current Organism:
Kryptolebias marmoratus
NCBI taxonomy Id: 37003
Other names: K. marmoratus, Rivulus marmoratus, mangrove rivulus, matanzas rivulus
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