Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC108233113 | LOC108241994 | ENSKMAP00000006628 | ENSKMAP00000022068 | Nuclear receptor subfamily 1, group H, member 5. | Retinoid x receptor, beta b. | 0.800 |
| LOC108233113 | med1 | ENSKMAP00000006628 | ENSKMAP00000023121 | Nuclear receptor subfamily 1, group H, member 5. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.783 |
| LOC108233113 | ncoa2 | ENSKMAP00000006628 | ENSKMAP00000009784 | Nuclear receptor subfamily 1, group H, member 5. | Nuclear receptor coactivator. | 0.731 |
| LOC108233113 | ncor1 | ENSKMAP00000006628 | ENSKMAP00000016456 | Nuclear receptor subfamily 1, group H, member 5. | Nuclear receptor corepressor 1. | 0.806 |
| LOC108233113 | ncor2 | ENSKMAP00000006628 | ENSKMAP00000026676 | Nuclear receptor subfamily 1, group H, member 5. | Nuclear receptor corepressor 2. | 0.806 |
| LOC108241994 | LOC108233113 | ENSKMAP00000022068 | ENSKMAP00000006628 | Retinoid x receptor, beta b. | Nuclear receptor subfamily 1, group H, member 5. | 0.800 |
| LOC108241994 | PPARA | ENSKMAP00000022068 | ENSKMAP00000022848 | Retinoid x receptor, beta b. | Peroxisome proliferator-activated receptor alpha b. | 0.728 |
| LOC108241994 | PPARG | ENSKMAP00000022068 | ENSKMAP00000013654 | Retinoid x receptor, beta b. | Peroxisome proliferator activated receptor gamma. | 0.728 |
| LOC108241994 | med1 | ENSKMAP00000022068 | ENSKMAP00000023121 | Retinoid x receptor, beta b. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.773 |
| LOC108241994 | ncoa2 | ENSKMAP00000022068 | ENSKMAP00000009784 | Retinoid x receptor, beta b. | Nuclear receptor coactivator. | 0.706 |
| LOC108241994 | ncor1 | ENSKMAP00000022068 | ENSKMAP00000016456 | Retinoid x receptor, beta b. | Nuclear receptor corepressor 1. | 0.769 |
| LOC108241994 | ncor2 | ENSKMAP00000022068 | ENSKMAP00000026676 | Retinoid x receptor, beta b. | Nuclear receptor corepressor 2. | 0.769 |
| LOC108241994 | nr1h3 | ENSKMAP00000022068 | ENSKMAP00000003552 | Retinoid x receptor, beta b. | Nuclear receptor subfamily 1, group H, member 3. | 0.911 |
| LOC108241994 | nr1h4 | ENSKMAP00000022068 | ENSKMAP00000006099 | Retinoid x receptor, beta b. | Nuclear receptor subfamily 1, group H, member 4. | 0.800 |
| LOC108241994 | ppard | ENSKMAP00000022068 | ENSKMAP00000009322 | Retinoid x receptor, beta b. | Peroxisome proliferator-activated receptor delta b. | 0.736 |
| PPARA | LOC108241994 | ENSKMAP00000022848 | ENSKMAP00000022068 | Peroxisome proliferator-activated receptor alpha b. | Retinoid x receptor, beta b. | 0.728 |
| PPARA | med1 | ENSKMAP00000022848 | ENSKMAP00000023121 | Peroxisome proliferator-activated receptor alpha b. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.898 |
| PPARA | ncoa2 | ENSKMAP00000022848 | ENSKMAP00000009784 | Peroxisome proliferator-activated receptor alpha b. | Nuclear receptor coactivator. | 0.677 |
| PPARA | ncor1 | ENSKMAP00000022848 | ENSKMAP00000016456 | Peroxisome proliferator-activated receptor alpha b. | Nuclear receptor corepressor 1. | 0.766 |
| PPARA | ncor2 | ENSKMAP00000022848 | ENSKMAP00000026676 | Peroxisome proliferator-activated receptor alpha b. | Nuclear receptor corepressor 2. | 0.766 |
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